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Antimicrobial Resistance Trends in Najaf (2023–2025) Study

A retrospective study from the University of Kufa analyzing antibiotic resistance patterns in E. coli, MRSA, and other pathogens in Najaf, Iraq.

#antimicrobial-resistance#amr#clinical-microbiology#antibiotics-history#mrsa#najaf-healthcare#public-health#pharmacology
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ANTIMICROBIAL RESISTANCE STUDY

Antimicrobial Resistance: From Antibiotic History to Clinical Surveillance

A Retrospective Analysis of Resistance Trends in Najaf, 2023–2025

Faculty of Pharmacy, University of Kufa | March 2026

Made byBobr AI

Presentation Outline

01

Introduction

The antibiotic revolution & AMR crisis

02

History of Antibiotics

From mouldy bread to modern drugs

03

Classification of Antibiotics

Natural, semi-synthetic & synthetic

04

Study Results

Resistance trends 2023–2025 in Najaf

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1.1 INTRODUCTION

The Antibiotic Revolution & AMR Crisis

💊
Greatest medical breakthrough of the 20th century — enabling cancer treatment, organ transplants & surgery
⚠️
Misuse has caused rapid rise of Antimicrobial Resistance (AMR) — some infections now untreatable
💀
O'Neill Report: 10 million deaths/year from drug-resistant infections predicted by 2050 without action
10 Million
deaths/year by 2050
Source: UK O'Neill Report
Key Recommendation
Stimulate early-stage natural product drug discovery
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1.2 HISTORY OF ANTIBIOTICS

A Brief History of Antibiotics

1550 BC
Eber's Papyrus: mouldy bread used as remedy
~1900s
Paul Ehrlich: Salvarsan, first systematic drug screen
1928
Alexander Fleming: Discovery of Penicillin
1940s
Waksman: Streptomycin & Golden Age begins
1945
Dorothy Hodgkin: Beta-lactam structure of penicillin solved
1940s–60s
Golden Age: Majority of current antibiotic classes discovered

Most Golden Age antibiotics still in clinical use — but effectiveness is being eroded by AMR

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1.3 CLASSIFICATION OF ANTIBIOTICS

Types of Antibiotics by Source

Natural
Antibiotics

Examples:

  • Penicillins
    (from Penicillium moulds)
  • Streptomyces-derived
    (streptomycin, neomycin)

"64% of known NP antibiotic classes from actinomycetes"

Semi-Synthetic
Antibiotics

Examples:

  • Glycopeptides
    (vancomycin, teicoplanin)
  • Clindamycin
  • Netilmicin
  • Amoxycillin

"Fermentation product +
chemical modification"

Synthetic
Antibiotics

Examples:

  • Quinolones
    (nalidixic acid)
  • Fluoroquinolones
    (ciprofloxacin, norfloxacin)

"Entirely lab-synthesized;
>10,000 quinolone agents made"

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2. METHODOLOGY

Study Design & Data Sources

Study Design

Retrospective, laboratory-based observational study | Najaf hospitals & healthcare centers | 2023–2025

Data Source

Institutional antibiogram database | Clinical microbiology lab | Specimens: urine, blood, respiratory, wounds

Study Population

All age groups & hospital units | 1,576 clinically significant bacterial isolates | First isolate per patient per period (CLSI guidelines)

Analysis

GraphPad Prism 10.3.1 | Chi-square test for temporal trends | p < 0.05 = significant

1,576
Total Isolates
3 Years
Study Period
2023–2025
Najaf, Iraq

Ethics: Approved by Faculty of Pharmacy, University of Kufa

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3. RESULTS

Annual Distribution of Bacterial Isolates (2023–2025)

Year:
2023
2024
2025
0
50
100
150
200
250
180
195
210
E. coli
95
102
108
K. pneumoniae
70
74
80
P. aeruginosa
85
88
90
S. aureus
45
48
50
Enterococcus spp.
Total isolates increased from 500 (2023) 526 (2024) 550 (2025)
E. coli
Total Isolates
585 isolates
(37.1%)
K. pneumoniae
Total Isolates
305 isolates
(19.4%)
P. aeruginosa
Total Isolates
224 isolates
(14.2%)
S. aureus
Total Isolates
263 isolates
(16.7%)
Enterococcus spp.
Total Isolates
143 isolates
(9.1%)
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3. RESULTS — E. COLI

E. coli Antimicrobial Resistance Trends 2023–2025

Chart

Amikacin & Nitrofurantoin remain relatively effective — valuable agents for E. coli infections

Significant!
Ciprofloxacin resistance:
45.0% → 56.7%
+11.7 pp p = 0.045
Ampicillin resistance remains consistently
HIGH at 77.6% in 2025
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3. RESULTS — GRAM-NEGATIVE PATHOGENS

Klebsiella pneumoniae & Pseudomonas aeruginosa Resistance

K. pneumoniae

Antibiotic 2023 2024 2025 Change
Ceftriaxone 60.0% 65.7% 72.2% +12.2 pp
Ciprofloxacin 45.3% 52.0% 58.3% +13.0 pp
Meropenem 13.7% 15.7% 20.4% +6.7 pp
Carbapenem (meropenem) resistance rising: 13.7% → 20.4% ⚠️

P. aeruginosa

Antibiotic 2023 2024 2025 Change
Ceftazidime 35.7% 41.9% 48.8% +13.1 pp
Meropenem 22.9% 28.4% 36.3% +13.4 pp
Pip-Tazobactam 27.1% 31.1% 35.0% +7.9 pp
Meropenem resistance rose +13.4 pp — largest increase in this organism ⚠️
None of the K. pneumoniae or P. aeruginosa changes reached statistical significance (p > 0.05)
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3. RESULTS — GRAM-POSITIVE PATHOGENS

S. aureus & Enterococcus spp. Resistance Trends

S. aureus

Cefoxitin (MRSA marker)
31.8% → 35.2% → 40.0%
Clindamycin
28.2% → 31.8% → 37.8%
Vancomycin
0.0% → 0.0% → 1.1%
Excellent activity retained
MRSA prevalence rising: 31.8% → 40.0% over 3 years

Enterococcus spp.

Ampicillin
46.7% → 50.0% → 56.0%
Vancomycin
6.7% → 8.3% → 12.0%
Linezolid
0.0% → 2.1% → 2.0%
Most active agent retained
VRE (vancomycin-resistant Enterococcus) showing gradual upward trend ⚠️
Vancomycin & linezolid remain last-resort options — preservation critical for antimicrobial stewardship
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3. RESULTS — MULTIDRUG RESISTANCE
MDR Patterns Among Major Pathogens
Escherichia coli
Ampicillin + Fluoroquinolone + Trimethoprim-sulfamethoxazole
24.3%
Klebsiella pneumoniae
Cephalosporin + Fluoroquinolone + Beta-lactam/BLI
35.4%
Pseudomonas aeruginosa
Ceftazidime + Carbapenem + Piperacillin-tazobactam
35.3%
Staphylococcus aureus  ★ HIGHEST
Methicillin + Macrolide + Lincosamide
35.7%
Enterococcus spp.
Ampicillin + Vancomycin
21.7%
MDR isolates represent a serious clinical burden — combination resistance patterns limit treatment options
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3. RESULTS — SUBGROUP ANALYSIS

Resistance: Inpatient vs. Outpatient Settings

Inpatient / ICU
Outpatient
0% 25% 50% 75% 100%
E. coli
Ciprofloxacin
57.0%
44.5%
★ p = 0.003
K. pneumoniae
Ceftriaxone
70.0%
61.5%
p = 0.118
P. aeruginosa
Meropenem
40.8%
19.8%
★ p = 0.001
S. aureus
Cefoxitin
41.4%
29.3%
★ p = 0.040
Enterococcus spp.
Vancomycin
12.8%
4.6%
p = 0.092

Key Finding

Inpatient isolates consistently show HIGHER resistance rates — particularly P. aeruginosa meropenem (+21%) and E. coli ciprofloxacin (+12.5%)

Inpatient/ICU settings require targeted antimicrobial stewardship interventions
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CONCLUSIONS

Key Findings & Clinical Implications

Key Findings

E. coli ciprofloxacin resistance increased significantly: 45% → 56.7% (p = 0.045)

Ampicillin resistance in E. coli persistently high at ~70–78%

Carbapenem resistance rising in K. pneumoniae (13.7% → 20.4%) and P. aeruginosa (22.9% → 36.3%)

MRSA prevalence increased from 31.8% to 40.0% over 3 years

MDR rates highest in S. aureus (35.7%), K. pneumoniae (35.4%), and P. aeruginosa (35.3%)

Clinical Implications

Restrict empirical fluoroquinolone use for E. coli infections in this region

Monitor carbapenem resistance — escalating rates threaten last-resort therapy

Implement targeted Antimicrobial Stewardship Programs, especially in inpatient/ICU settings

Vancomycin & Linezolid remain effective last-resort agents — stewardship essential to preserve them

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ANTIMICROBIAL RESISTANCE STUDY | UNIVERSITY OF KUFA

Thank You

Faculty of Pharmacy, University of Kufa
Najaf, Iraq | March 2026
Questions?

Data source: Institutional antibiogram database, Najaf 2023–2025

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Antimicrobial Resistance Trends in Najaf (2023–2025) Study

A retrospective study from the University of Kufa analyzing antibiotic resistance patterns in E. coli, MRSA, and other pathogens in Najaf, Iraq.

ANTIMICROBIAL RESISTANCE STUDY

Antimicrobial Resistance: From Antibiotic History to Clinical Surveillance

A Retrospective Analysis of Resistance Trends in Najaf, 2023–2025

Faculty of Pharmacy, University of Kufa | March 2026

Presentation Outline

01

Introduction

The antibiotic revolution & AMR crisis

02

History of Antibiotics

From mouldy bread to modern drugs

03

Classification of Antibiotics

Natural, semi-synthetic & synthetic

04

Study Results

Resistance trends 2023–2025 in Najaf

1.1 INTRODUCTION

The Antibiotic Revolution & AMR Crisis

Greatest medical breakthrough of the 20th century — enabling cancer treatment, organ transplants & surgery

Misuse has caused rapid rise of Antimicrobial Resistance (AMR) — some infections now untreatable

O'Neill Report: 10 million deaths/year from drug-resistant infections predicted by 2050 without action

10 Million

deaths/year by 2050

Source: UK O'Neill Report

Stimulate early-stage natural product drug discovery

1.2 HISTORY OF ANTIBIOTICS

A Brief History of Antibiotics

Most Golden Age antibiotics still in clinical use — but effectiveness is being eroded by AMR

1550 BC

Eber's Papyrus: mouldy bread used as remedy

~1900s

Paul Ehrlich: Salvarsan, first systematic drug screen

1928

Alexander Fleming: Discovery of Penicillin

1940s

Waksman: Streptomycin & Golden Age begins

1945

Dorothy Hodgkin: Beta-lactam structure of penicillin solved

1940s–60s

Golden Age: Majority of current antibiotic classes discovered

1.3 CLASSIFICATION OF ANTIBIOTICS

Types of Antibiotics by Source

2. METHODOLOGY

Study Design & Data Sources

Study Design

Retrospective, laboratory-based observational study | Najaf hospitals & healthcare centers | 2023–2025

Data Source

Institutional antibiogram database | Clinical microbiology lab | Specimens: urine, blood, respiratory, wounds

Study Population

All age groups & hospital units | 1,576 clinically significant bacterial isolates | First isolate per patient per period (CLSI guidelines)

Analysis

GraphPad Prism 10.3.1 | Chi-square test for temporal trends | p < 0.05 = significant

1,576

Total Isolates

3 Years

Study Period

2023–2025

Najaf, Iraq

Ethics: Approved by Faculty of Pharmacy, University of Kufa

3. RESULTS

Annual Distribution of Bacterial Isolates (2023–2025)

E. coli

585 isolates

(37.1%)

K. pneumoniae

305 isolates

(19.4%)

P. aeruginosa

224 isolates

(14.2%)

S. aureus

263 isolates

(16.7%)

Enterococcus spp.

143 isolates

(9.1%)

3. RESULTS &mdash; E. COLI

E. coli Antimicrobial Resistance Trends 2023–2025

Significant!

3. RESULTS — GRAM-NEGATIVE PATHOGENS

Klebsiella pneumoniae & Pseudomonas aeruginosa Resistance

K. pneumoniae

Ceftriaxone

60.0%

65.7%

72.2%

+12.2 pp

Ciprofloxacin

45.3%

52.0%

58.3%

+13.0 pp

Meropenem

13.7%

15.7%

20.4%

+6.7 pp

Carbapenem (meropenem) resistance rising: 13.7% → 20.4% ⚠️

P. aeruginosa

Ceftazidime

35.7%

41.9%

48.8%

+13.1 pp

Meropenem

22.9%

28.4%

36.3%

+13.4 pp

Pip-Tazobactam

27.1%

31.1%

35.0%

+7.9 pp

Meropenem resistance rose +13.4 pp — largest increase in this organism ⚠️

None of the K. pneumoniae or P. aeruginosa changes reached statistical significance (p > 0.05)

3. RESULTS — GRAM-POSITIVE PATHOGENS

S. aureus & Enterococcus spp. Resistance Trends

S. aureus

Cefoxitin (MRSA marker)

31.8% → 35.2% → 40.0%

Clindamycin

28.2% → 31.8% → 37.8%

Vancomycin

0.0% → 0.0% → 1.1%

Excellent activity retained

MRSA prevalence rising: 31.8% → 40.0% over 3 years

Enterococcus spp.

Ampicillin

46.7% → 50.0% → 56.0%

Vancomycin

6.7% → 8.3% → 12.0%

Linezolid

0.0% → 2.1% → 2.0%

Most active agent retained

VRE (vancomycin-resistant Enterococcus) showing gradual upward trend ⚠️

Vancomycin & linezolid remain last-resort options — preservation critical for antimicrobial stewardship

3. RESULTS — MULTIDRUG RESISTANCE

MDR Patterns Among Major Pathogens

Escherichia coli

Ampicillin + Fluoroquinolone + Trimethoprim-sulfamethoxazole

24.3%

Klebsiella pneumoniae

Cephalosporin + Fluoroquinolone + Beta-lactam/BLI

35.4%

Pseudomonas aeruginosa

Ceftazidime + Carbapenem + Piperacillin-tazobactam

35.3%

Staphylococcus aureus

★ HIGHEST

Methicillin + Macrolide + Lincosamide

35.7%

Enterococcus

spp.

Ampicillin + Vancomycin

21.7%

MDR isolates represent a serious clinical burden — combination resistance patterns limit treatment options

3. RESULTS — SUBGROUP ANALYSIS

Resistance: Inpatient vs. Outpatient Settings

Inpatient/ICU settings require targeted antimicrobial stewardship interventions

CONCLUSIONS

Key Findings & Clinical Implications

Key Findings

Clinical Implications

<i>E. coli</i> ciprofloxacin resistance increased significantly: 45% &rarr; 56.7% (p = 0.045)

Ampicillin resistance in <i>E. coli</i> persistently high at ~70&ndash;78%

Carbapenem resistance rising in <i>K. pneumoniae</i> (13.7% &rarr; 20.4%) and <i>P. aeruginosa</i> (22.9% &rarr; 36.3%)

MRSA prevalence increased from 31.8% to 40.0% over 3 years

MDR rates highest in <i>S. aureus</i> (35.7%), <i>K. pneumoniae</i> (35.4%), and <i>P. aeruginosa</i> (35.3%)

Restrict empirical fluoroquinolone use for <i>E. coli</i> infections in this region

Monitor carbapenem resistance &mdash; escalating rates threaten last-resort therapy

Implement targeted Antimicrobial Stewardship Programs, especially in inpatient/ICU settings

Vancomycin & Linezolid remain effective last-resort agents &mdash; stewardship essential to preserve them

ANTIMICROBIAL RESISTANCE STUDY | UNIVERSITY OF KUFA

Thank You

Faculty of Pharmacy, University of Kufa

Najaf, Iraq | March 2026

Questions?

Data source: Institutional antibiogram database, Najaf 2023–2025

  • antimicrobial-resistance
  • amr
  • clinical-microbiology
  • antibiotics-history
  • mrsa
  • najaf-healthcare
  • public-health
  • pharmacology