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Antimicrobial Resistance Trends in Najaf (2023–2025) Study

A retrospective study from the University of Kufa analyzing antibiotic resistance patterns in E. coli, MRSA, and other pathogens in Najaf, Iraq.

#antimicrobial-resistance#amr#clinical-microbiology#antibiotics-history#mrsa#najaf-healthcare#public-health#pharmacology
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ANTIMICROBIAL RESISTANCE STUDY

Antimicrobial Resistance: From Antibiotic History to Clinical Surveillance

A Retrospective Analysis of Resistance Trends in Najaf, 2023–2025

Faculty of Pharmacy, University of Kufa | March 2026

Made byBobr AI

Presentation Outline

01

Introduction

The antibiotic revolution & AMR crisis

02

History of Antibiotics

From mouldy bread to modern drugs

03

Classification of Antibiotics

Natural, semi-synthetic & synthetic

04

Study Results

Resistance trends 2023–2025 in Najaf

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1.1 INTRODUCTION

The Antibiotic Revolution & AMR Crisis

💊
Greatest medical breakthrough of the 20th century — enabling cancer treatment, organ transplants & surgery
⚠️
Misuse has caused rapid rise of Antimicrobial Resistance (AMR) — some infections now untreatable
💀
O'Neill Report: 10 million deaths/year from drug-resistant infections predicted by 2050 without action
10 Million
deaths/year by 2050
Source: UK O'Neill Report
Key Recommendation
Stimulate early-stage natural product drug discovery
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1.2 HISTORY OF ANTIBIOTICS

A Brief History of Antibiotics

1550 BC
Eber's Papyrus: mouldy bread used as remedy
~1900s
Paul Ehrlich: Salvarsan, first systematic drug screen
1928
Alexander Fleming: Discovery of Penicillin
1940s
Waksman: Streptomycin & Golden Age begins
1945
Dorothy Hodgkin: Beta-lactam structure of penicillin solved
1940s–60s
Golden Age: Majority of current antibiotic classes discovered

Most Golden Age antibiotics still in clinical use — but effectiveness is being eroded by AMR

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1.3 CLASSIFICATION OF ANTIBIOTICS

Types of Antibiotics by Source

Natural
Antibiotics

Examples:

  • Penicillins
    (from Penicillium moulds)
  • Streptomyces-derived
    (streptomycin, neomycin)

"64% of known NP antibiotic classes from actinomycetes"

Semi-Synthetic
Antibiotics

Examples:

  • Glycopeptides
    (vancomycin, teicoplanin)
  • Clindamycin
  • Netilmicin
  • Amoxycillin

"Fermentation product +
chemical modification"

Synthetic
Antibiotics

Examples:

  • Quinolones
    (nalidixic acid)
  • Fluoroquinolones
    (ciprofloxacin, norfloxacin)

"Entirely lab-synthesized;
>10,000 quinolone agents made"

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2. METHODOLOGY

Study Design & Data Sources

Study Design

Retrospective, laboratory-based observational study | Najaf hospitals & healthcare centers | 2023–2025

Data Source

Institutional antibiogram database | Clinical microbiology lab | Specimens: urine, blood, respiratory, wounds

Study Population

All age groups & hospital units | 1,576 clinically significant bacterial isolates | First isolate per patient per period (CLSI guidelines)

Analysis

GraphPad Prism 10.3.1 | Chi-square test for temporal trends | p < 0.05 = significant

1,576
Total Isolates
3 Years
Study Period
2023–2025
Najaf, Iraq

Ethics: Approved by Faculty of Pharmacy, University of Kufa

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3. RESULTS

Annual Distribution of Bacterial Isolates (2023–2025)

Year:
2023
2024
2025
0
50
100
150
200
250
180
195
210
E. coli
95
102
108
K. pneumoniae
70
74
80
P. aeruginosa
85
88
90
S. aureus
45
48
50
Enterococcus spp.
↑
Total isolates increased from 500 (2023) ➔ 526 (2024) ➔ 550 (2025)
E. coli
Total Isolates
585 isolates
(37.1%)
K. pneumoniae
Total Isolates
305 isolates
(19.4%)
P. aeruginosa
Total Isolates
224 isolates
(14.2%)
S. aureus
Total Isolates
263 isolates
(16.7%)
Enterococcus spp.
Total Isolates
143 isolates
(9.1%)
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3. RESULTS — E. COLI

E. coli Antimicrobial Resistance Trends 2023–2025

Chart

Amikacin & Nitrofurantoin remain relatively effective — valuable agents for E. coli infections

★ Significant!
Ciprofloxacin resistance:
45.0% → 56.7%
+11.7 pp p = 0.045
Ampicillin resistance remains consistently
HIGH at 77.6% in 2025
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3. RESULTS — GRAM-NEGATIVE PATHOGENS

Klebsiella pneumoniae & Pseudomonas aeruginosa Resistance

K. pneumoniae

Antibiotic 2023 2024 2025 Change
Ceftriaxone 60.0% → 65.7% → 72.2% +12.2 pp
Ciprofloxacin 45.3% → 52.0% → 58.3% +13.0 pp
Meropenem 13.7% → 15.7% → 20.4% +6.7 pp
Carbapenem (meropenem) resistance rising: 13.7% → 20.4% ⚠️

P. aeruginosa

Antibiotic 2023 2024 2025 Change
Ceftazidime 35.7% → 41.9% → 48.8% +13.1 pp
Meropenem 22.9% → 28.4% → 36.3% +13.4 pp
Pip-Tazobactam 27.1% → 31.1% → 35.0% +7.9 pp
Meropenem resistance rose +13.4 pp — largest increase in this organism ⚠️
None of the K. pneumoniae or P. aeruginosa changes reached statistical significance (p > 0.05)
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3. RESULTS — GRAM-POSITIVE PATHOGENS

S. aureus & Enterococcus spp. Resistance Trends

S. aureus

Cefoxitin (MRSA marker)
31.8% → 35.2% → 40.0%
↑
Clindamycin
28.2% → 31.8% → 37.8%
↑
Vancomycin
0.0% → 0.0% → 1.1%
✓
Excellent activity retained
MRSA prevalence rising: 31.8% → 40.0% over 3 years

Enterococcus spp.

Ampicillin
46.7% → 50.0% → 56.0%
↑
Vancomycin
6.7% → 8.3% → 12.0%
↑
Linezolid
0.0% → 2.1% → 2.0%
✓
Most active agent retained
VRE (vancomycin-resistant Enterococcus) showing gradual upward trend ⚠️
★ Vancomycin & linezolid remain last-resort options — preservation critical for antimicrobial stewardship ★
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3. RESULTS — MULTIDRUG RESISTANCE
MDR Patterns Among Major Pathogens
Escherichia coli
Ampicillin + Fluoroquinolone + Trimethoprim-sulfamethoxazole
24.3%
Klebsiella pneumoniae
Cephalosporin + Fluoroquinolone + Beta-lactam/BLI
35.4%
Pseudomonas aeruginosa
Ceftazidime + Carbapenem + Piperacillin-tazobactam
35.3%
Staphylococcus aureus  ★ HIGHEST
Methicillin + Macrolide + Lincosamide
35.7%
Enterococcus spp.
Ampicillin + Vancomycin
21.7%
MDR isolates represent a serious clinical burden — combination resistance patterns limit treatment options
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3. RESULTS — SUBGROUP ANALYSIS

Resistance: Inpatient vs. Outpatient Settings

Inpatient / ICU
Outpatient
0% 25% 50% 75% 100%
E. coli
Ciprofloxacin
57.0%
44.5%
★ p = 0.003
K. pneumoniae
Ceftriaxone
70.0%
61.5%
p = 0.118
P. aeruginosa
Meropenem
40.8%
19.8%
★ p = 0.001
S. aureus
Cefoxitin
41.4%
29.3%
★ p = 0.040
Enterococcus spp.
Vancomycin
12.8%
4.6%
p = 0.092

Key Finding

Inpatient isolates consistently show HIGHER resistance rates — particularly P. aeruginosa meropenem (+21%) and E. coli ciprofloxacin (+12.5%)

Inpatient/ICU settings require targeted antimicrobial stewardship interventions
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CONCLUSIONS

Key Findings & Clinical Implications

Key Findings

E. coli ciprofloxacin resistance increased significantly: 45% → 56.7% (p = 0.045)

Ampicillin resistance in E. coli persistently high at ~70–78%

Carbapenem resistance rising in K. pneumoniae (13.7% → 20.4%) and P. aeruginosa (22.9% → 36.3%)

MRSA prevalence increased from 31.8% to 40.0% over 3 years

MDR rates highest in S. aureus (35.7%), K. pneumoniae (35.4%), and P. aeruginosa (35.3%)

Clinical Implications

Restrict empirical fluoroquinolone use for E. coli infections in this region

Monitor carbapenem resistance — escalating rates threaten last-resort therapy

Implement targeted Antimicrobial Stewardship Programs, especially in inpatient/ICU settings

Vancomycin & Linezolid remain effective last-resort agents — stewardship essential to preserve them

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ANTIMICROBIAL RESISTANCE STUDY | UNIVERSITY OF KUFA

Thank You

Faculty of Pharmacy, University of Kufa
Najaf, Iraq | March 2026
Questions?

Data source: Institutional antibiogram database, Najaf 2023–2025

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Antimicrobial Resistance Trends in Najaf (2023–2025) Study

A retrospective study from the University of Kufa analyzing antibiotic resistance patterns in E. coli, MRSA, and other pathogens in Najaf, Iraq.

ANTIMICROBIAL RESISTANCE STUDY

Antimicrobial Resistance: From Antibiotic History to Clinical Surveillance

A Retrospective Analysis of Resistance Trends in Najaf, 2023–2025

Faculty of Pharmacy, University of Kufa | March 2026

Presentation Outline

01

Introduction

The antibiotic revolution & AMR crisis

02

History of Antibiotics

From mouldy bread to modern drugs

03

Classification of Antibiotics

Natural, semi-synthetic & synthetic

04

Study Results

Resistance trends 2023–2025 in Najaf

1.1 INTRODUCTION

The Antibiotic Revolution & AMR Crisis

Greatest medical breakthrough of the 20th century — enabling cancer treatment, organ transplants & surgery

Misuse has caused rapid rise of Antimicrobial Resistance (AMR) — some infections now untreatable

O'Neill Report: 10 million deaths/year from drug-resistant infections predicted by 2050 without action

10 Million

deaths/year by 2050

Source: UK O'Neill Report

Stimulate early-stage natural product drug discovery

1.2 HISTORY OF ANTIBIOTICS

A Brief History of Antibiotics

Most Golden Age antibiotics still in clinical use — but effectiveness is being eroded by AMR

1550 BC

Eber's Papyrus: mouldy bread used as remedy

~1900s

Paul Ehrlich: Salvarsan, first systematic drug screen

1928

Alexander Fleming: Discovery of Penicillin

1940s

Waksman: Streptomycin & Golden Age begins

1945

Dorothy Hodgkin: Beta-lactam structure of penicillin solved

1940s–60s

Golden Age: Majority of current antibiotic classes discovered

1.3 CLASSIFICATION OF ANTIBIOTICS

Types of Antibiotics by Source

2. METHODOLOGY

Study Design & Data Sources

Study Design

Retrospective, laboratory-based observational study | Najaf hospitals & healthcare centers | 2023–2025

Data Source

Institutional antibiogram database | Clinical microbiology lab | Specimens: urine, blood, respiratory, wounds

Study Population

All age groups & hospital units | 1,576 clinically significant bacterial isolates | First isolate per patient per period (CLSI guidelines)

Analysis

GraphPad Prism 10.3.1 | Chi-square test for temporal trends | p < 0.05 = significant

1,576

Total Isolates

3 Years

Study Period

2023–2025

Najaf, Iraq

Ethics: Approved by Faculty of Pharmacy, University of Kufa

3. RESULTS

Annual Distribution of Bacterial Isolates (2023–2025)

E. coli

585 isolates

(37.1%)

K. pneumoniae

305 isolates

(19.4%)

P. aeruginosa

224 isolates

(14.2%)

S. aureus

263 isolates

(16.7%)

Enterococcus spp.

143 isolates

(9.1%)

3. RESULTS &mdash; E. COLI

E. coli Antimicrobial Resistance Trends 2023–2025

Significant!

3. RESULTS — GRAM-NEGATIVE PATHOGENS

Klebsiella pneumoniae & Pseudomonas aeruginosa Resistance

K. pneumoniae

Ceftriaxone

60.0%

65.7%

72.2%

+12.2 pp

Ciprofloxacin

45.3%

52.0%

58.3%

+13.0 pp

Meropenem

13.7%

15.7%

20.4%

+6.7 pp

Carbapenem (meropenem) resistance rising: 13.7% → 20.4% ⚠️

P. aeruginosa

Ceftazidime

35.7%

41.9%

48.8%

+13.1 pp

Meropenem

22.9%

28.4%

36.3%

+13.4 pp

Pip-Tazobactam

27.1%

31.1%

35.0%

+7.9 pp

Meropenem resistance rose +13.4 pp — largest increase in this organism ⚠️

None of the K. pneumoniae or P. aeruginosa changes reached statistical significance (p > 0.05)

3. RESULTS — GRAM-POSITIVE PATHOGENS

S. aureus & Enterococcus spp. Resistance Trends

S. aureus

Cefoxitin (MRSA marker)

31.8% → 35.2% → 40.0%

Clindamycin

28.2% → 31.8% → 37.8%

Vancomycin

0.0% → 0.0% → 1.1%

Excellent activity retained

MRSA prevalence rising: 31.8% → 40.0% over 3 years

Enterococcus spp.

Ampicillin

46.7% → 50.0% → 56.0%

Vancomycin

6.7% → 8.3% → 12.0%

Linezolid

0.0% → 2.1% → 2.0%

Most active agent retained

VRE (vancomycin-resistant Enterococcus) showing gradual upward trend ⚠️

Vancomycin & linezolid remain last-resort options — preservation critical for antimicrobial stewardship

3. RESULTS — MULTIDRUG RESISTANCE

MDR Patterns Among Major Pathogens

Escherichia coli

Ampicillin + Fluoroquinolone + Trimethoprim-sulfamethoxazole

24.3%

Klebsiella pneumoniae

Cephalosporin + Fluoroquinolone + Beta-lactam/BLI

35.4%

Pseudomonas aeruginosa

Ceftazidime + Carbapenem + Piperacillin-tazobactam

35.3%

Staphylococcus aureus

★ HIGHEST

Methicillin + Macrolide + Lincosamide

35.7%

Enterococcus

spp.

Ampicillin + Vancomycin

21.7%

MDR isolates represent a serious clinical burden — combination resistance patterns limit treatment options

3. RESULTS — SUBGROUP ANALYSIS

Resistance: Inpatient vs. Outpatient Settings

Inpatient/ICU settings require targeted antimicrobial stewardship interventions

CONCLUSIONS

Key Findings & Clinical Implications

Key Findings

Clinical Implications

<i>E. coli</i> ciprofloxacin resistance increased significantly: 45% &rarr; 56.7% (p = 0.045)

Ampicillin resistance in <i>E. coli</i> persistently high at ~70&ndash;78%

Carbapenem resistance rising in <i>K. pneumoniae</i> (13.7% &rarr; 20.4%) and <i>P. aeruginosa</i> (22.9% &rarr; 36.3%)

MRSA prevalence increased from 31.8% to 40.0% over 3 years

MDR rates highest in <i>S. aureus</i> (35.7%), <i>K. pneumoniae</i> (35.4%), and <i>P. aeruginosa</i> (35.3%)

Restrict empirical fluoroquinolone use for <i>E. coli</i> infections in this region

Monitor carbapenem resistance &mdash; escalating rates threaten last-resort therapy

Implement targeted Antimicrobial Stewardship Programs, especially in inpatient/ICU settings

Vancomycin & Linezolid remain effective last-resort agents &mdash; stewardship essential to preserve them

ANTIMICROBIAL RESISTANCE STUDY | UNIVERSITY OF KUFA

Thank You

Faculty of Pharmacy, University of Kufa

Najaf, Iraq | March 2026

Questions?

Data source: Institutional antibiogram database, Najaf 2023–2025